Mauricio Carneiro b22a3d6508 Functional VCF output. ... It is outputting a VCF with the 'second best guess' for the alternate allele correctly. Annotations are added at the pool level, but may get overwritten at the lane and site level. Still need to implement the merging of the the annotations at higher levels.		2011-08-04 17:49:08 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Functional VCF output.	2011-08-04 17:49:08 -04:00
test	Merge branch 'master' of ssh://copper.broadinstitute.org/humgen/gsa-scr1/gsa-engineering/git/unstable	2011-07-25 10:59:00 -04:00