depristo e510798bc2 Missed one uncomment ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5159 348d0f76-0448-11de-a6fe-93d51630548a		2011-02-01 13:01:59 +00:00
..
TraverseTest.sh	Move non-java code out of playground.	2009-03-23 19:31:38 +00:00
TraverseTestProf.sh	Move non-java code out of playground.	2009-03-23 19:31:38 +00:00
getFirehosePipelineYaml.sh	Now populating the refseq and dbsnp in awk instead of retrieving from firehose.	2011-01-19 18:19:10 +00:00
pipelineJobs.csh	watch -n 30 shell/pipelineJobs.csh for those who want to watch the gsaadm's jobs progress	2011-01-09 13:09:30 +00:00
queue.sh	Cleaning up obsolete code.	2011-01-21 16:27:35 +00:00
queueStatus.csh	Better queue status messages	2010-12-22 20:17:28 +00:00
runGATKReport.csh	Missed one uncomment	2011-02-01 13:01:59 +00:00
runbeagle.sh	a) Add input argument (-ncrate) to BeagleOutputToVCFWalker. If the genotype posterior error probability is higher than this threshold, we declare No-call at this genotype.	2010-07-06 18:33:28 +00:00
syncWithDevOnGSA2.csh	V3 of the distributed GATK. High-efficiency implementation. Support for status tracking for debugging and display. Still not safe for production use due to NFS filelock problem. V4 will use alternative file locking mechanism	2011-01-24 16:45:07 +00:00