Ryan Poplin 1a18947abf Adding new command line argument requested on the forum to control the maximum number of haplotypes that are sent forward for genotyping. In the presence of a large degree of heterozygosity the current algorithm breaks down and so this argument would need to be increased.		2013-01-09 15:54:02 -05:00
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gatk	Adding new command line argument requested on the forum to control the maximum number of haplotypes that are sent forward for genotyping. In the presence of a large degree of heterozygosity the current algorithm breaks down and so this argument would need to be increased.	2013-01-09 15:54:02 -05:00
utils	Resolve protected->public dependencies for BQSR by wrapping the BQSR-specific arguments in a new class.	2013-01-08 16:23:29 -05:00
package-info.java	build system overhaul	2012-05-17 15:16:29 -04:00