gatk3的最后一个经典版本3.8

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Johan Dahlberg b045f2d4aa ParallelShell added as a new JobRunner The ParallelShell job runner will run jobs locally on one node concurrently as specified by the DAG, with the option to limit the maximum number of concurrently running jobs using the flag `maximumNumberOfJobsToRunConcurrently`. Signed-off-by: Khalid Shakir <kshakir@broadinstitute.org>		2015-09-29 09:36:37 -03:00
licensing	Updated licenses for 2015	2015-08-06 15:23:11 -04:00
protected	addressing PR comments	2015-09-24 15:42:51 -04:00
public	ParallelShell added as a new JobRunner	2015-09-29 09:36:37 -03:00
settings/helpTemplates	Numerous doc fixes; mostly formatting and clarifications	2015-05-03 00:28:46 +02:00
.gitignore	Fixed bug using GraphBased due to infinite likelihoods resulting from the calculation of alignment cost of very long insertion or deletions (done in linear scale)	2014-04-01 16:14:52 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Added faster built executable, non-packaged jars.	2014-11-05 00:30:46 +08:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Using `SamIndexes.asBaiSeekableStreamOrNull()` to support `.cram.crai`.	2015-09-14 12:20:36 -04:00

The Genome Analysis Toolkit