gatk-3.8/java
hanna af7a759ba4 Convert the somatic coverage tool to output from the packaging tool rather than from the dist target.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1050 348d0f76-0448-11de-a6fe-93d51630548a
2009-06-18 21:29:30 +00:00
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config Provide a default logger, some config settings, and some doc updates. 2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting Convert the somatic coverage tool to output from the packaging tool rather than from the dist target. 2009-06-18 21:29:30 +00:00
test/org/broadinstitute/sting added changes to support alec toUnmappedRead seek. Huge improvements (orders of magnitude) in unmapped read performance. 2009-06-16 22:15:56 +00:00