ebanks 1e06d2bf68 Initial HLA Caller integration tests. Kind of painful, but will improve with code refactoring. ... This baby is now officially ours. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3593 348d0f76-0448-11de-a6fe-93d51630548a		2010-06-18 20:35:27 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	Mendelian Violation Classifier now filters violations on the fly via command line arguments; and closes unterminated homozygous regions at the end of a chromosome (so we see arms falling off in the file, rather than in the log)	2010-06-18 19:32:24 +00:00
test/org/broadinstitute/sting	Initial HLA Caller integration tests. Kind of painful, but will improve with code refactoring.	2010-06-18 20:35:27 +00:00