gatk-3.8/public/testdata/combine.3.vcf

9 lines
508 B
Plaintext

##fileformat=VCFv4.0
##FORMAT=<ID=PL,Number=G,Type=Integer,Description="Phred-scaled likelihoods for AA,AB,BB genotypes where A=ref and B=alt">
##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype quality">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT NA12891 NA12892
20 10000000 . T G . PASS . GT:PL 0/1:10,0,10 0/1:10,0,12
20 10000117 . C T . PASS . GT:PL 0/1:10,0,10 0/0:0,10,80
20 10000211 . C T . PASS . GT:PL 0/1:10,0,10 1/1:90,10,0