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Eric Banks adb77b406f Fixed poor implementation of isRefSource() and isRefSink() among others. 
There was already a note in the code about how wrong the implementation was.
The bad code was causing a single-node graph to get cleaned up into nothing when pruning tails.
Delivers PT #61069820.
 		2013-11-21 10:53:27 -05:00
..
src/org/broadinstitute/sting Fixed poor implementation of isRefSource() and isRefSink() among others. 2013-11-21 10:53:27 -05:00
test/org/broadinstitute/sting Fixed poor implementation of isRefSource() and isRefSink() among others. 2013-11-21 10:53:27 -05:00