Eric Banks adb77b406f Fixed poor implementation of isRefSource() and isRefSink() among others. ... There was already a note in the code about how wrong the implementation was. The bad code was causing a single-node graph to get cleaned up into nothing when pruning tails. Delivers PT #61069820.		2013-11-21 10:53:27 -05:00
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java	Fixed poor implementation of isRefSource() and isRefSink() among others.	2013-11-21 10:53:27 -05:00
scala/test/org/broadinstitute/sting/queue/pipeline/examples	Fix improper dependencies in QScripts used by pipeline tests, and attempt to fix the flawed MisencodedBaseQualityUnitTest	2013-02-27 04:45:53 -05:00