Mauricio Carneiro df996a1a73 more progress report for the Data Processing Pipeline. ... Bam lists can now have empty lines, comments and whitespaces anywhere.		2011-07-13 14:53:58 -04:00
..
examples	moving the example scala scripts to the qscripts package.	2011-07-01 16:14:59 -04:00
lib	moving the example scala scripts to the qscripts package.	2011-07-01 16:14:59 -04:00
DataProcessingPipeline.scala	more progress report for the Data Processing Pipeline.	2011-07-13 14:53:58 -04:00
GATKResourcesBundle.scala	new home for the core qscripts	2011-06-30 11:32:06 -04:00
MethodsDevelopmentCallingPipeline.scala	Making the outputDir optional. Default = ./	2011-07-05 16:30:41 -04:00
RecalibrateBaseQualities.scala	Changing the file names as per Kris request.	2011-07-13 12:59:18 -04:00
StandardVariantEvaluation.scala	new home for the core qscripts	2011-06-30 11:32:06 -04:00