David Benjamin aecaa6d38e Allow GenotypeGVCFs to emit ref sites.		2016-04-27 15:53:44 -04:00
..
VectorPairHMM	Update licenses	2016-03-05 01:09:43 -08:00
c	After renaming the packages, instead of updating the JNI library used for testing bwa, moving the classes to the archive.	2014-05-19 17:36:41 -04:00
chainFiles	The contig is named MT not M in b36. Delivers PT68890442.	2014-04-08 10:03:47 -04:00
doc	Updated readme in public/doc to just point to the website	2015-03-12 11:52:48 -04:00
external-example	Update licenses	2016-03-05 01:09:43 -08:00
gatk-engine	Moved BQSRGatherer and dependencies to the public module	2016-04-27 07:15:28 -04:00
gatk-queue	Update licenses	2016-03-05 01:09:43 -08:00
gatk-queue-extensions-generator	Update licenses	2016-03-05 01:09:43 -08:00
gatk-queue-extensions-public	Update licenses	2016-03-05 01:09:43 -08:00
gatk-root	Move htsjdk and picard to version 2.0.0	2016-04-25 14:51:25 -04:00
gatk-tools-public	Move htsjdk and picard to version 2.0.0	2016-04-25 14:51:25 -04:00
gatk-utils	Allow GenotypeGVCFs to emit ref sites.	2016-04-27 15:53:44 -04:00
gsalib	Update pom versions to mark the start of GATK 3.6 development	2015-11-25 01:52:51 -05:00
java/config	Refactored maven directories and java packages replacing "sting" with "gatk".	2014-05-19 17:36:39 -04:00
package-tests	Update pom versions to mark the start of GATK 3.6 development	2015-11-25 01:52:51 -05:00
repo	Updated gatk so it compiles on java 8	2015-06-26 15:59:46 -04:00
src/main	Added faster built executable, non-packaged jars.	2014-11-05 00:30:46 +08:00
pom.xml	Update pom versions to mark the start of GATK 3.6 development	2015-11-25 01:52:51 -05:00