gatk-3.8/java/test/org/broadinstitute/sting/gatk
chartl ac983e7a0b Ran the rod on a binary plink file with indels and it just worked. Love it when that happens! Unit test to ensure this behaviour is maintained.
****** PLINK ROD IS NOW READY TO GO ********




git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2670 348d0f76-0448-11de-a6fe-93d51630548a
2010-01-23 18:13:05 +00:00
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arguments Looks bigger than it is: 2010-01-15 00:14:35 +00:00
datasources First successful test of new sharding system prototype. Can traverse over reads from a single 2010-01-15 03:35:55 +00:00
executive Added IterableLocusContextQueue and test. Cleaned up tests, adding BaseTest where it didn't exist. Enhanced test runner to run only classes ending in ...Test.java, so that utility classes can sit alongside the tests but won't be run by JUnit. 2009-05-13 21:32:05 +00:00
io Fix for problem where err stream remapped to output stream in certain cases, (hopefully) completing Matt's hat trick of fail. Thanks, unit tests. 2009-09-16 08:33:56 +00:00
iterators ant clean is your friend....fixed test code dependent on an interface change. 2010-01-22 20:07:46 +00:00
refdata Ran the rod on a binary plink file with indels and it just worked. Love it when that happens! Unit test to ensure this behaviour is maintained. 2010-01-23 18:13:05 +00:00
traversals First successful test of new sharding system prototype. Can traverse over reads from a single 2010-01-15 03:35:55 +00:00
walkers - Fixed output for beagle header 2010-01-21 21:25:56 +00:00