gatk-3.8/java/test/net/sf
hanna deab9f0aa5 Initial work on proto-shard merger:
- create size() method that returns an approximation of the uncompressed size in bytes of BAM span.
  I'll use this method as a protoshard weighting function until we determine how to normalize the
  weights across the different data access mechanisms (reads, reference, RODs).
- Implementations of basic union/intersection/subtraction mechanisms for BAM spans; should be enough
  to get an accurate weight for two proto-shards put together.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5541 348d0f76-0448-11de-a6fe-93d51630548a
2011-03-30 22:03:43 +00:00
..
picard/reference A few minor modifications masquerading as significant changes according to 2011-02-03 17:59:19 +00:00
samtools Initial work on proto-shard merger: 2011-03-30 22:03:43 +00:00