carneiro 2a48ec1307 now only accepts intervals files if the user specifically requests to report bams at interval only. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5291 348d0f76-0448-11de-a6fe-93d51630548a		2011-02-23 16:49:58 +00:00
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dataProcessing.scala	now only accepts intervals files if the user specifically requests to report bams at interval only.	2011-02-23 16:49:58 +00:00
pbCalling.scala	Data Processing Pipeline: local indel realignment, mark duplicates and BQSR. Done.	2011-02-16 17:22:30 +00:00