gatk3的最后一个经典版本3.8

Mark DePristo abd94b2976 Bugfix for handling invalid records in NA12878 KB ... -- The previous approach tried to remove the entire MongoVariantContext but when it was malformed was prone to error. Now just grabs the _id and uses it to remove the bad record.		2012-12-06 10:24:24 -05:00
licensing	Final final final version of the license.	2012-07-20 18:00:02 -04:00
protected/java	Got caught in the middle of a bad integration test, that was fixed in independent push. Moved test bam into testdata.	2012-12-05 14:49:22 -05:00
public	PrintReads large-scale test to protect against another major low-level performance issue	2012-12-05 21:36:27 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Refactored entire NA12878KB to allow us to easily build a na12878kb.jar for IGV integration	2012-11-29 14:38:09 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Use build jars in test classpaths by default	2012-11-28 22:57:04 -05:00