gatk3的最后一个经典版本3.8

Alec Wysoker ab75e053da Reduce memory footprint of SyntheticRead by replacing several Lists with a single List of a small private static ... class that contains the attributes that were scattered across the several Lists.		2013-02-19 15:33:33 -05:00
licensing	Removing the symlink from the private license file	2013-02-09 12:57:44 -05:00
protected/java	Reduce memory footprint of SyntheticRead by replacing several Lists with a single List of a small private static	2013-02-19 15:33:33 -05:00
public	ActivityProfile and ActiveRegions respects engine interval boundaries	2013-02-18 10:40:25 -05:00
settings	Refactored GATKDocs categories some more ( GSATDG-62 )	2013-02-13 16:49:18 -05:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Minor build.xml cleanup post-variant-migration	2013-02-06 11:16:52 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Replace org.broadinstitute.variant with jar built from the Picard repo	2013-02-05 17:24:25 -05:00