Mark DePristo 243af0adb1 Expanded the BQSR reporting script ... -- Includes header page -- Table of arguments (Arguments) -- Summary of counts (RecalData0) -- Summary of counts by qual (RecalData1) -- Fixed bug in output that resulted in covariates list always being null (updated md5s accordingly) -- BQSR.R loads all relevant libaries now, include gplots, grid, and gsalib to run correctly		2012-08-12 13:45:14 -04:00
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gatk/walkers/variantrecalibration	Updating VQSR docs. Removing references to old best practices pages.	2012-08-01 14:30:24 -04:00
queue/util	Bugfix for R 2.15 not including reshape	2012-06-14 16:42:29 -04:00
utils/recalibration	Expanded the BQSR reporting script	2012-08-12 13:45:14 -04:00