Mark DePristo 243af0adb1 Expanded the BQSR reporting script ... -- Includes header page -- Table of arguments (Arguments) -- Summary of counts (RecalData0) -- Summary of counts by qual (RecalData1) -- Fixed bug in output that resulted in covariates list always being null (updated md5s accordingly) -- BQSR.R loads all relevant libaries now, include gplots, grid, and gsalib to run correctly		2012-08-12 13:45:14 -04:00
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scripts/org/broadinstitute/sting	Expanded the BQSR reporting script	2012-08-12 13:45:14 -04:00
src/org/broadinstitute/sting/utils/R/gsalib	GATK Error messages now point to the new website instead of GetSatisfaction.	2012-07-20 17:27:11 -04:00