gatk3的最后一个经典版本3.8

Yossi Farjoun aa99a5f47c Added an option to print out the version string ... @argument (-)-version (should this be @hidden?) Prints out the version to System.out and quit(0) No tests. (any ideas on how to test this would be happily accepted)		2013-02-15 12:42:59 -05:00
licensing	Removing the symlink from the private license file	2013-02-09 12:57:44 -05:00
protected/java	Merge pull request #37 from broadinstitute/rp_left_alignment_hc_contract_GSA-771	2013-02-15 08:32:45 -08:00
public	Added an option to print out the version string	2013-02-15 12:42:59 -05:00
settings	Refactored GATKDocs categories some more ( GSATDG-62 )	2013-02-13 16:49:18 -05:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Minor build.xml cleanup post-variant-migration	2013-02-06 11:16:52 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Replace org.broadinstitute.variant with jar built from the Picard repo	2013-02-05 17:24:25 -05:00