Mark DePristo c0bbeb23ba Now providing more information when the index on the fly isn't equal to the one created by reading the file from disk.		2011-07-14 15:12:28 -04:00
..
commandline	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
gatk	Oops, forgot to update unit test	2011-07-14 14:00:19 -04:00
jna	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
pipeline	Cleanup of the utils.broad package.	2011-07-01 20:47:03 -04:00
utils	Don't output source and ref header lines anymore. Short-term motivation for this is that I'd like this tool when run on a VCF to emit the exact same VCF. Long-term motivation is that these tags should be output by the VCF writer itself for all tools.	2011-07-13 14:40:01 -04:00
BaseTest.java	DiffEngine utility function simpleDiffFiles	2011-07-11 23:10:27 -04:00
StingTextReporter.java	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
WalkerTest.java	Now providing more information when the index on the fly isn't equal to the one created by reading the file from disk.	2011-07-14 15:12:28 -04:00