David Roazen a96ed385df ReadShard.getReadsSpan(): handle case where shard contains only unmapped mates ... Nasty, nasty bug -- if we were extremely unlucky with shard boundaries, we might end up with a shard containing only unmapped mates of mapped reads. In this case, ReadShard.getReadsSpan() would not behave correctly, since the shard as a whole would be marked "mapped" (since it refers to mapped intervals) yet consist only of unmapped mates of mapped reads located within those intervals.		2012-10-02 13:50:00 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	ReadShard.getReadsSpan(): handle case where shard contains only unmapped mates	2012-10-02 13:50:00 -04:00
test	Merged bug fix from Stable into Unstable	2012-09-29 00:57:43 -04:00