gatk-3.8/doc_archive/developer-zone
Geraldine Van der Auwera 3f3ef608e5 Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
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(howto)_Set_up_remote_debugging_in_IntelliJ.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
(howto)_Speed_up_GATK_compilation.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Accessing_reads:_AlignmentContext_and_ReadBackedPileup.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Adding_and_updating_dependencies_[RETIRED].md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Collecting_output.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Documenting_walkers.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Frequently_asked_questions_about_Scala.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
GATK_development_process_and_coding_standards.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
How_to_access_the_picard_and_htsjdk_repository_(containing_samtools-jdk,_tribble,_and_variant).md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
How_to_include_GATK_in_a_Maven_project.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
How_to_make_a_walker_compatible_with_multi-threading.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Managing_user_inputs.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Managing_walker_data_presentation_and_flow_control.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Migration_from_Apache_Ant_to_Apache_Maven.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Notes_on_downsampling_in_HC_M2.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Output_management.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Scala_resources.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Seeing_deletion_spanning_reads_in_LocusWalkers.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Setting_up_your_dev_environment:_Maven_and_IntelliJ_for_GATK_3+.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Sting_to_GATK_renaming.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Tribble.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Using_DiffEngine_to_summarize_differences_between_structured_data_files.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Writing_GATKdocs_for_your_walkers.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Writing_and_working_with_reference_metadata_classes.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Writing_unit_tests_for_walkers.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Writing_walkers.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00
Writing_walkers_in_Scala.md Archive GATK3-specific docs from the forum 2017-07-24 00:57:50 +02:00