gatk-3.8/java
hanna a8caa20378 Previously the hierarchical microscheduler defensively coded around and reported exceptions of
the walker itself, but didn't do a great job of catching framework exceptions.  This became extremely
unfortunate in the case where walkers caused exceptions that manifested themselves in the framework,
such as when the walker opens more files than file handles are available.

Reworked the exception handling so that framework errors are treated like walker errors and the resulting
exception bubbles out of the walker.  Stack traces for threaded walkers are still convoluted and nasty.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3794 348d0f76-0448-11de-a6fe-93d51630548a
2010-07-14 20:34:43 +00:00
..
config Provide a default logger, some config settings, and some doc updates. 2009-04-29 02:06:05 +00:00
src Previously the hierarchical microscheduler defensively coded around and reported exceptions of 2010-07-14 20:34:43 +00:00
test oops, forgot to update this integration test 2010-07-14 11:38:33 +00:00