kshakir a898908918 The output BAM file optional arguments of compression and whether to write an index are not outputs themselves. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4302 348d0f76-0448-11de-a6fe-93d51630548a		2010-09-17 15:35:54 +00:00
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broadinstitute/sting	The output BAM file optional arguments of compression and whether to write an index are not outputs themselves.	2010-09-17 15:35:54 +00:00