Mark DePristo 98ecaf8aa0 Support for ReducedReads with reduced counts and average quals ... -- ReadUtils and UnitTest updated to support new byte[] style -- Removed unnecessary read transformer in PairHMM		2011-09-29 17:18:39 -04:00
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net/sf	Removed annoying FastaSequenceIndexBuilderProgressListener infrastructure that was just a boolean switch on whether to print progress or not.	2011-07-27 22:06:23 -04:00
org/broadinstitute/sting	Support for ReducedReads with reduced counts and average quals	2011-09-29 17:18:39 -04:00