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gatk-3.8/java/lib/edu/mit/broad/picard
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depristo 49a84c965e Added basic GenomeLoc class 
Support for operating on any location in genome (albeit slowly)
Improvements to dbSNP support

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@19 348d0f76-0448-11de-a6fe-93d51630548a
 		2009-03-02 18:18:48 +00:00
..
aligner Basic reorganization of tree 2009-02-28 15:28:56 +00:00
cmdline Basic reorganization of tree 2009-02-28 15:28:56 +00:00
directed Basic reorganization of tree 2009-02-28 15:28:56 +00:00
filter Basic reorganization of tree 2009-02-28 15:28:56 +00:00
genotype Basic reorganization of tree 2009-02-28 15:28:56 +00:00
illumina Basic reorganization of tree 2009-02-28 15:28:56 +00:00
importer/genotype Basic reorganization of tree 2009-02-28 15:28:56 +00:00
io Basic reorganization of tree 2009-02-28 15:28:56 +00:00
metrics Basic reorganization of tree 2009-02-28 15:28:56 +00:00
quality Basic reorganization of tree 2009-02-28 15:28:56 +00:00
reference Basic reorganization of tree 2009-02-28 15:28:56 +00:00
sam Basic reorganization of tree 2009-02-28 15:28:56 +00:00
util Added basic GenomeLoc class 2009-03-02 18:18:48 +00:00
variation Basic reorganization of tree 2009-02-28 15:28:56 +00:00
PicardException.java Basic reorganization of tree 2009-02-28 15:28:56 +00:00