-- function to create pileup elements in AlignmentStateMachine and LIBS -- Cleanup pileup element constructors, directing users to LIBS.createPileupFromRead() that really does the right thing |
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|---|---|---|
| .. | ||
| AlignmentUtilsUnitTest.java | ||
| ArtificialPatternedSAMIteratorUnitTest.java | ||
| ArtificialSAMFileWriterUnitTest.java | ||
| ArtificialSAMQueryIteratorUnitTest.java | ||
| ArtificialSAMUtilsUnitTest.java | ||
| ArtificialSingleSampleReadStreamUnitTest.java | ||
| GATKSAMRecordUnitTest.java | ||
| MisencodedBaseQualityUnitTest.java | ||
| ReadUtilsUnitTest.java | ||