Ryan Poplin a6886a4cc0 Initial commit of the Active Region Traversal. Not ready to be used by anyone yet.		2012-01-04 17:03:21 -05:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Initial commit of the Active Region Traversal. Not ready to be used by anyone yet.	2012-01-04 17:03:21 -05:00
test	Enabled banded indel computation by default. Reversed logic in input UG argument so that we can still disable it if required. Minor changes to integration tests due to minor differences in GL's and in annotations	2012-01-04 15:28:26 -05:00