Mark DePristo 3b799db61a RefMetaDataTracker cleanup and unit tests ... You know have to provide an explicit list of RODRecordLists upfront to the constructor. RefMetaDataTracker is now immutable. Changes in engine to incorporate these differences Extensive UnitTests for RefMetaDataTracker now.		2011-07-29 13:23:17 -04:00
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arguments	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
datasources	Continuing refactoring of RefMetaDataTracker.	2011-07-28 17:48:28 -04:00
executive	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
filters	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
iterators	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
refdata	RefMetaDataTracker cleanup and unit tests	2011-07-29 13:23:17 -04:00
report	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
traversals	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
walkers	Uncovered fundamental accounting bug in VariantEval. Will be fixed by dev. team	2011-07-28 14:19:27 -04:00
GenomeAnalysisEngineUnitTest.java	Fixing broken paths to the testdata directory throughout the codebase.	2011-06-29 17:36:47 -04:00
WalkerManagerUnitTest.java	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00