Mark DePristo 2a42b47e4a Massive expansion of ActiveRegionTraversal unit tests, resulting in several bugfixes to ART ... -- UnitTests now include combinational tiling of reads within and spanning shard boundaries -- ART now properly handles shard transitions, and does so efficiently without requiring hash sets or other collections of reads -- Updating HC and CountReadsInActiveRegions integration tests		2013-01-16 15:30:00 -05:00
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DummyActiveRegionWalker.java	Massive expansion of ActiveRegionTraversal unit tests, resulting in several bugfixes to ART	2013-01-16 15:30:00 -05:00
TraverseActiveRegionsUnitTest.java	Massive expansion of ActiveRegionTraversal unit tests, resulting in several bugfixes to ART	2013-01-16 15:30:00 -05:00
TraverseDuplicatesUnitTest.java	Cleanup ART	2013-01-11 15:17:17 -05:00
TraverseReadsUnitTest.java	Cleanup ART	2013-01-11 15:17:17 -05:00