gatk3的最后一个经典版本3.8

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Geraldine Van der Auwera a5f4b4305b Revived this walker for GP; it does a simple super-fast coverage analysis with GC content and number of dbsnp variants annotated		2015-09-24 13:23:05 -04:00
licensing	Updated licenses for 2015	2015-08-06 15:23:11 -04:00
protected	Allow overriding ValidateVariants' hard-coded cutoff for allele length	2015-09-17 10:49:14 -04:00
public	Adding PER_TARGET_COVERAGE option	2015-09-18 09:34:51 -04:00
settings/helpTemplates	Numerous doc fixes; mostly formatting and clarifications	2015-05-03 00:28:46 +02:00
.gitignore	Fixed bug using GraphBased due to infinite likelihoods resulting from the calculation of alignment cost of very long insertion or deletions (done in linear scale)	2014-04-01 16:14:52 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Added faster built executable, non-packaged jars.	2014-11-05 00:30:46 +08:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Using `SamIndexes.asBaiSeekableStreamOrNull()` to support `.cram.crai`.	2015-09-14 12:20:36 -04:00

The Genome Analysis Toolkit