Mauricio Carneiro a5e75cd14c Outputting both consensus base qualities and counts ... The base qualities of a consensus reads are now the average quality of the bases forming the consensus base (most common base) and the consensus quality tag now carry an array with the counts of each base in the consensus. This should increase file size but improve calling sensitivity/specificity.		2011-09-29 12:54:41 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Outputting both consensus base qualities and counts	2011-09-29 12:54:41 -04:00
test	Disabling all ReadClipperUnitTests	2011-09-29 12:20:35 -04:00