gatk3的最后一个经典版本3.8

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meganshand a57500b2fc ROCCurve High Confidence Mode Integration Tests Updated test Changed method Minor changes Changed whitespace Fixed uncalled counts and 0 in R Fixed ReadBackedPileUp Removed imports and changed MD5 Fixed failing test Adding vqslod color Updating script to create KB Fixing integration test now that the KB is bigger Adressing comments		2015-10-21 21:30:54 -04:00
licensing	Updated licenses for 2015	2015-08-06 15:23:11 -04:00
protected	VariantAnnotator now supports annotating FILTER field from an external resource.	2015-10-14 14:26:21 -04:00
public	ROCCurve High Confidence Mode	2015-10-21 21:30:54 -04:00
settings/helpTemplates	Numerous doc fixes; mostly formatting and clarifications	2015-05-03 00:28:46 +02:00
.gitignore	Fixed bug using GraphBased due to infinite likelihoods resulting from the calculation of alignment cost of very long insertion or deletions (done in linear scale)	2014-04-01 16:14:52 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Added faster built executable, non-packaged jars.	2014-11-05 00:30:46 +08:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Using `SamIndexes.asBaiSeekableStreamOrNull()` to support `.cram.crai`.	2015-09-14 12:20:36 -04:00

The Genome Analysis Toolkit