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annotator
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Updated all JAVA file licenses accordingly
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2013-01-10 17:06:41 -05:00 |
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beagle
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Updated all JAVA file licenses accordingly
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2013-01-10 17:06:41 -05:00 |
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bqsr
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PrintReads writes a header when used with -BQSR
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2013-02-14 22:19:14 -05:00 |
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compression/reducereads
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Brought all of ReduceReads to fastutils
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2013-02-23 22:53:23 -05:00 |
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diagnostics
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walker to calculate per base coverage distribution
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2013-02-07 16:33:05 -05:00 |
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diffengine
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Updated all JAVA file licenses accordingly
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2013-01-10 17:06:41 -05:00 |
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fasta
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Updated all JAVA file licenses accordingly
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2013-01-10 17:06:41 -05:00 |
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filters
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Updated all JAVA file licenses accordingly
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2013-01-10 17:06:41 -05:00 |
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genotyper
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Change default downsampling coverage target for the HaplotypeCaller to 250
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2013-02-26 09:33:25 -05:00 |
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haplotypecaller
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Change default downsampling coverage target for the HaplotypeCaller to 250
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2013-02-26 09:33:25 -05:00 |
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indels
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Fixed IndelRealigner reference length bug (GSA-774)
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2013-02-19 16:00:36 -05:00 |
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phasing
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Updated all JAVA file licenses accordingly
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2013-01-10 17:06:41 -05:00 |
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validation
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Updated all JAVA file licenses accordingly
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2013-01-10 17:06:41 -05:00 |
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varianteval
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Move some VCF/VariantContext methods back to the GATK based on feedback
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2013-01-29 16:56:55 -05:00 |
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variantrecalibration
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Updated all JAVA file licenses accordingly
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2013-01-10 17:06:41 -05:00 |
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variantutils
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Replace org.broadinstitute.variant with jar built from the Picard repo
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2013-02-05 17:24:25 -05:00 |
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