Mauricio Carneiro a3c3d72313 Added test mode to DPP ... * in test mode, no @PG tags are output to the final bam file * updated pipeline test to use -test mode. * MD5s are now dependent on BWA version		2011-12-12 18:29:06 -05:00
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examples	GATK read group requirement iron hand	2011-10-06 08:40:35 -07:00
DataProcessingPipelineTest.scala	Added test mode to DPP	2011-12-12 18:29:06 -05:00
PacbioProcessingPipelineTest.scala	Updating MD5s -- really dont know why it didn't update before	2011-12-12 09:48:58 -05:00
PipelineTest.scala	Embedding gsalib source and queueJobReport R scripts in the dist and package jars.	2011-10-24 15:58:34 -04:00
PipelineTestEvalSpec.scala	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
PipelineTestSpec.scala	Updates to JobRunners from the Queue developer community and from running the WholeGenomePipeline:	2011-08-22 15:13:27 -04:00