hanna a38b2be329 Fix for old, broken invariant where unmapped reads are represented by null rather than an empty BAMFileSpan. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5819 348d0f76-0448-11de-a6fe-93d51630548a		2011-05-18 20:57:38 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	Fix for old, broken invariant where unmapped reads are represented by null rather than an empty BAMFileSpan.	2011-05-18 20:57:38 +00:00
test	Cleanup GATKBAMIndex unit test to allow a more efficient access pattern for	2011-05-12 21:50:33 +00:00