gatk3的最后一个经典版本3.8

Mark DePristo a281fa6548 Resolves Genome Sequence Analysis GSA-750 Don't print an endless series of starting messages from the ProgressMeter ... -- The progress meter isn't started until the GATK actually calls execute on the microscheduler. Now we get a message saying "Creating shard strategy" while this (expensive) operation runs		2013-02-04 15:47:30 -05:00
licensing	Refrain from pushing symlinks into the repo... not all filesystems treat it correctly	2013-01-22 15:18:19 -07:00
protected/java	Added some docs, unit test, and contracts to SimpleDeBruijnAssembler.	2013-02-04 15:17:22 -05:00
public	Resolves Genome Sequence Analysis GSA-750 Don't print an endless series of starting messages from the ProgressMeter	2013-02-04 15:47:30 -05:00
settings	Rev picard, sam-jdk, and tribble	2013-02-01 13:51:30 -05:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Move AWS keys to a resources subdirectory within the phonehome package	2013-01-31 11:56:34 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	ReadBackedPileup cleanup	2013-01-11 15:17:18 -05:00