gatk3的最后一个经典版本3.8
 
 
 
 
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Eric Banks a26b04ba17 Extensive refactoring of the GATKReports. This was a beast.
The practical differences between version 1.0 and this one (v1.1) are:

* the underlying data structure now uses arrays instead of hashes, which should drastically reduce the memory overhead required to create large tables.
* no more primary keys; you can still create arbitrary IDs to index into rows, but there is no special cased primary key column in the table.
* no more dangerous/ugly table operations supported except to increment a cell's value (if an int) or to concatenate 2 tables.

Integration tests change because table headers are different.
Old classes are still lying around.  Will clean those up in a subsequent commit.
2012-05-18 01:11:26 -04:00
licensing Remove old licensing 2012-04-25 12:23:08 -04:00
protected/java/src/org/broadinstitute/sting build system overhaul 2012-05-17 15:16:29 -04:00
public Extensive refactoring of the GATKReports. This was a beast. 2012-05-18 01:11:26 -04:00
settings Rev. tribble to v101 with another putative open file leak fix 2012-05-04 15:40:41 -04:00
.gitignore Minor additions to the shared .gitignore file, now that Mark has checked one in. 2011-10-26 12:24:28 -04:00
build.xml build system overhaul 2012-05-17 15:16:29 -04:00
ivy.xml build system overhaul 2012-05-17 15:16:29 -04:00