gatk-3.8/protected/java
Mauricio Carneiro a234bacb02 Making nContigs parameter hidden in ReduceReads
For now, the het reduction should only be performed for diploids (n=2). We haven't really tested it for other ploidy so it should remain hidden until someone braves it out.
2012-10-15 13:49:08 -04:00
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src/org/broadinstitute/sting Making nContigs parameter hidden in ReduceReads 2012-10-15 13:49:08 -04:00
test/org/broadinstitute/sting/gatk/walkers Increasing the precision of MathUtils.approximateLog10SumLog10 from 1E-3 to 1E-4. Genotyper integration tests change as a result. Expanding the unit tests of MathUtils.log10sumLog10. 2012-10-15 13:24:32 -04:00