gatk3的最后一个经典版本3.8

Mauricio Carneiro a234bacb02 Making nContigs parameter hidden in ReduceReads ... For now, the het reduction should only be performed for diploids (n=2). We haven't really tested it for other ploidy so it should remain hidden until someone braves it out.		2012-10-15 13:49:08 -04:00
licensing	Revert unintentional license change	2012-08-09 17:10:47 -04:00
protected/java	Making nContigs parameter hidden in ReduceReads	2012-10-15 13:49:08 -04:00
public	upgraded mutation caller with VCF output	2012-10-15 13:49:08 -04:00
settings	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00
.gitignore	a few more useful git ignores	2012-09-01 11:08:36 -04:00
build.xml	Proper error handling in NanoScheduler	2012-09-19 17:03:13 -04:00
ivy.xml	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00