Mark DePristo a1b4cafe7a Bug fix for NPE when timer wasn't initialized		2011-09-20 13:59:59 -04:00
..
R	Merge branch 'master' into sgintervals	2011-09-19 09:50:19 -04:00
c	Reinitialize random seed in the bwa bindings from the fixed seed stored in the	2011-07-22 13:41:53 -04:00
chainFiles	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
doc	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
java	Bug fix for NPE when timer wasn't initialized	2011-09-20 13:59:59 -04:00
packages	Removing some old cruft from the packages dir. Updating AnalyzeCovariates to include all Covariates.	2011-09-12 15:09:25 -04:00
perl	Update to the bindings for liftOverVCF.pl (to -V from -B)	2011-09-15 15:33:09 -04:00
scala	Updating to use new rod system syntax plus name change for CountRODs	2011-09-19 13:30:32 -04:00
testdata	GZIP VCF for testing	2011-08-19 09:05:39 -04:00