asivache a17d725c35 Cache pileup bases and mapping quals after first call to getBases() and getMappingQuals(), respectively. Subsequent calls to these method will return cached arrays. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2525 348d0f76-0448-11de-a6fe-93d51630548a		2010-01-06 18:05:00 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	Cache pileup bases and mapping quals after first call to getBases() and getMappingQuals(), respectively. Subsequent calls to these method will return cached arrays.	2010-01-06 18:05:00 +00:00
test/org/broadinstitute/sting	Temporary command-line support to enable rod walkers, if you know what you are doing this is safe.	2010-01-06 12:15:36 +00:00