chartl b24172c80f Queue now utilizes .[file].done to allow skipping of previous jobs, if they have been completed. This is, unfortunately, reliant on a python script to do the post-execution touching of .done files. ... That is to say, proper resumability is live (but not extensively tested) git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4312 348d0f76-0448-11de-a6fe-93d51630548a		2010-09-20 00:16:53 +00:00
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org/broadinstitute/sting/queue	Queue now utilizes .[file].done to allow skipping of previous jobs, if they have been completed. This is, unfortunately, reliant on a python script to do the post-execution touching of .done files.	2010-09-20 00:16:53 +00:00
BaseTransitionTableCalculator.scala	Scala walkers can now be build and run like any other walker in the GATK. Added the getUrlsForClasspath to PackageUtils, the Reflections package isn't getting the manifest files from jars in the classpath, and so we weren't seeing any walkers outside of the GenomeAnalysisTK.jar.	2009-11-02 06:02:41 +00:00
HelloWorld.scala	support for scala walkers	2009-08-28 00:15:01 +00:00
ScalaCountLoci.scala	Scala walkers can now be build and run like any other walker in the GATK. Added the getUrlsForClasspath to PackageUtils, the Reflections package isn't getting the manifest files from jars in the classpath, and so we weren't seeing any walkers outside of the GenomeAnalysisTK.jar.	2009-11-02 06:02:41 +00:00