gatk3的最后一个经典版本3.8

Mark DePristo a0602e534c PostCallingQC and variantCallQC.R vastly improved ... -- All new IndelSummary features used by default with variantCallQC.R script with PostCallingQC.scala -- This includes many new per sample and per AC indel QC metrics. -- Better plotting style throughout, with nice histograms, white backgrounds, etc -- PostCallingQC is super easy to use now, just give it --evalvcfs and go. Tell it to run with 8 threads to finish quick. It's really easy and produces beautiful new figures (will replace with one attached)		2012-03-22 21:24:37 -04:00
public	Unified, standard IndelSummary metrics for VariantEval	2012-03-22 21:24:37 -04:00
settings	Rev. tribble to fix BED codec bug in tribble 51	2012-01-17 16:40:26 -05:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
LICENSE	One last test...	2011-06-28 19:18:17 -04:00
build.xml	Public-key authorization scheme to restrict use of NO_ET	2012-03-06 00:09:43 -05:00
ivy.xml	S3 upload now directly creates the XML report in memory and puts that in S3	2012-01-29 15:14:58 -05:00