gatk-3.8/protected/gatk-tools-protected/src/main/java/org/broadinstitute/gatk
Valentin Ruano-Rubio 9ee9da36bb Generalize the calculation of the genotype likelihoods in HC to cope with haploid and multiploidy
Changes in several walker to use new sample, allele closed lists and new GenotypingEngine constructors signatures

Rebase adoption of new calculation system in walkers
2014-08-19 11:53:06 -04:00
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engine/arguments Generalize the calculation of the genotype likelihoods in HC to cope with haploid and multiploidy 2014-08-19 11:53:06 -04:00
genotyping Generalize the calculation of the genotype likelihoods in HC to cope with haploid and multiploidy 2014-08-19 11:53:06 -04:00
tools/walkers Generalize the calculation of the genotype likelihoods in HC to cope with haploid and multiploidy 2014-08-19 11:53:06 -04:00
utils Generalize the calculation of the genotype likelihoods in HC to cope with haploid and multiploidy 2014-08-19 11:53:06 -04:00
package-info.java Refactored maven directories and java packages replacing "sting" with "gatk". 2014-05-19 17:36:39 -04:00