Mark DePristo 502592671d Cleanup FragmentPileup before main repo commit ... -- removed intermiate functions. Now only original version and best optimized new version remain -- Moved general artificial read backed pileup creation code into ArtificialSamUtils		2011-10-24 14:40:05 -04:00
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R	Fixing errors in queueJobReport runtime unit	2011-10-07 12:04:53 -07:00
c	…
chainFiles	…
doc	…
java	Cleanup FragmentPileup before main repo commit	2011-10-24 14:40:05 -04:00
packages	Enable testing of the jars produced by the packaging system.	2011-10-14 03:08:28 -04:00
perl	Update to the bindings for liftOverVCF.pl (to -V from -B)	2011-09-15 15:33:09 -04:00
scala	no sort order	2011-10-20 18:44:09 -04:00
testdata	Oops, forgot the PED test file	2011-10-05 21:09:08 -07:00