gatk3的最后一个经典版本3.8

Mark DePristo 9de8077eeb Working (efficient?) implementation of NanoScheduler ... -- Groups inputs for each thread so that we don't have one thread execution per map() call -- Added shutdown function -- Documentation everywhere -- Code cleanup -- Extensive unittests -- At this point I'm ready to integrate it into the engine for CPU parallel read walkers		2012-08-24 15:34:23 -04:00
licensing	Revert unintentional license change	2012-08-09 17:10:47 -04:00
protected/java	HaplotypeCaller forbids BAQ	2012-08-24 13:25:05 -04:00
public	Working (efficient?) implementation of NanoScheduler	2012-08-24 15:34:23 -04:00
settings	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
build.xml	Convert external.build.dir and external.dist.dir back to paths	2012-08-15 23:04:10 -04:00
ivy.xml	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00