kiran 9ddee96f93 When subsetting by sample, need to take extra care that hom-ref sites don't accidentally get treated as variant sites in CompOverlap. Renamed convenience method for creating command-lines in integration tests. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5272 348d0f76-0448-11de-a6fe-93d51630548a		2011-02-18 06:26:38 +00:00
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net/sf/picard/reference	A few minor modifications masquerading as significant changes according to	2011-02-03 17:59:19 +00:00
org/broadinstitute/sting	When subsetting by sample, need to take extra care that hom-ref sites don't accidentally get treated as variant sites in CompOverlap. Renamed convenience method for creating command-lines in integration tests.	2011-02-18 06:26:38 +00:00