Mark DePristo 9dc694b2e9 Meaningful error message and keeping tmp file when mergeInfo fails ... -- BCF2 is failing for some reason when merging tmp. files with parallel combine variants. ThreadLocalOutputTracker no longer sets deleteOnExit on the tmp file, as this prevents debugging. And it's unnecessary because each mergeInto was deleting files as appropriate -- MergeInfo in VariantContextWriterStorage only deletes the intermediate output if an error occurs		2012-08-16 13:03:13 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Meaningful error message and keeping tmp file when mergeInfo fails	2012-08-16 13:03:13 -04:00
test	Update md5 in VariantRecalibrationWalkers test for BCF2 -- only encoding differences	2012-08-16 13:03:13 -04:00