gatk3的最后一个经典版本3.8

Mark DePristo 9dc694b2e9 Meaningful error message and keeping tmp file when mergeInfo fails ... -- BCF2 is failing for some reason when merging tmp. files with parallel combine variants. ThreadLocalOutputTracker no longer sets deleteOnExit on the tmp file, as this prevents debugging. And it's unnecessary because each mergeInto was deleting files as appropriate -- MergeInfo in VariantContextWriterStorage only deletes the intermediate output if an error occurs		2012-08-16 13:03:13 -04:00
licensing	Revert unintentional license change	2012-08-09 17:10:47 -04:00
protected/java	Adding tests for the --solid_nocall_strategy argument	2012-08-15 23:13:24 -04:00
public	Meaningful error message and keeping tmp file when mergeInfo fails	2012-08-16 13:03:13 -04:00
settings	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
build.xml	Convert external.build.dir and external.dist.dir back to paths	2012-08-15 23:04:10 -04:00
ivy.xml	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00